Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 AC108734.2-201ENST00000420887 1069 ntBASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 OR51A9P-201ENST00000422578 911 ntBASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 AC083801.1-201ENST00000491689 358 ntBASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 AL627230.2-201ENST00000613254 655 ntBASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTC1Q2NKJ3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 AC099521.3-201ENST00000624251 2938 ntBASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 CICP8-201ENST00000455800 2813 ntBASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 MIR1301-201ENST00000408518 82 ntBASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 KRT18P46-201ENST00000435568 1279 ntBASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 AC063952.3-201ENST00000467756 308 ntBASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 TREHP1-201ENST00000531328 465 ntBASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ABHD17AP9-201ENST00000561925 548 ntBASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 AC105206.1-202ENST00000314927 2368 ntBASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.13■□□□□ 0.01
CTC1Q2NKJ3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms