Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ERCC3P19447 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ERCC3P19447 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC3P19447 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC3P19447 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.46■□□□□ 0.22
ERCC3P19447 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC3P19447 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC3P19447 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.46■□□□□ 0.22
ERCC3P19447 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
ERCC3P19447 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 AC006372.4-201ENST00000624122 1543 ntBASIC16.45■□□□□ 0.22
ERCC3P19447 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC3P19447 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ERCC3P19447 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC3P19447 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC3P19447 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 BAK1P1-201ENST00000317045 636 ntBASIC16.45■□□□□ 0.22
ERCC3P19447 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 AL357563.1-201ENST00000404728 395 ntBASIC16.45■□□□□ 0.22
ERCC3P19447 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC3P19447 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC3P19447 DPY19L2P5-201ENST00000456300 331 ntBASIC16.45■□□□□ 0.22
ERCC3P19447 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC3P19447 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC3P19447 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.45■□□□□ 0.22
ERCC3P19447 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.45■□□□□ 0.22
ERCC3P19447 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC3P19447 AC005586.2-201ENST00000563946 837 ntBASIC16.45■□□□□ 0.22
ERCC3P19447 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC3P19447 MIR2392-201ENST00000584881 84 ntBASIC16.45■□□□□ 0.22
ERCC3P19447 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC3P19447 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC3P19447 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.45■□□□□ 0.22
ERCC3P19447 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
ERCC3P19447 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
ERCC3P19447 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.45■□□□□ 0.22
ERCC3P19447 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC3P19447 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 AC005840.4-201ENST00000541242 2494 ntBASIC16.45■□□□□ 0.22
ERCC3P19447 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ERCC3P19447 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ERCC3P19447 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ERCC3P19447 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC3P19447 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ERCC3P19447 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ERCC3P19447 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 TEKT4P2-202ENST00000559466 1312 ntBASIC16.45■□□□□ 0.22
ERCC3P19447 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC3P19447 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 AGGF1P1-201ENST00000509500 2073 ntBASIC16.44■□□□□ 0.22
ERCC3P19447 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC3P19447 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC3P19447 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.44■□□□□ 0.22
ERCC3P19447 RN7SKP109-201ENST00000410592 316 ntBASIC16.44■□□□□ 0.22
ERCC3P19447 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC3P19447 AL157792.1-201ENST00000488281 530 ntBASIC16.44■□□□□ 0.22
ERCC3P19447 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ERCC3P19447 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
ERCC3P19447 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC3P19447 AC007952.4-201ENST00000573866 637 ntBASIC16.44■□□□□ 0.22
ERCC3P19447 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC3P19447 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.44■□□□□ 0.22
ERCC3P19447 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ERCC3P19447 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.44■□□□□ 0.22
ERCC3P19447 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.44■□□□□ 0.22
ERCC3P19447 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.44■□□□□ 0.22
ERCC3P19447 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.44■□□□□ 0.22
ERCC3P19447 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ERCC3P19447 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms