Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.46□□□□□ -0.41
SFTPBP07988 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.46□□□□□ -0.41
SFTPBP07988 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.46□□□□□ -0.41
SFTPBP07988 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.46□□□□□ -0.41
SFTPBP07988 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 YBX1P6-201ENST00000442962 1002 ntBASIC12.46□□□□□ -0.41
SFTPBP07988 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SFTPBP07988 RNA5SP486-201ENST00000515961 83 ntBASIC12.46□□□□□ -0.41
SFTPBP07988 AP003171.2-201ENST00000528208 925 ntBASIC12.46□□□□□ -0.41
SFTPBP07988 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SFTPBP07988 AC079316.1-201ENST00000548397 411 ntBASIC12.46□□□□□ -0.41
SFTPBP07988 AL583810.1-201ENST00000553344 1045 ntBASIC12.46□□□□□ -0.41
SFTPBP07988 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.46□□□□□ -0.41
SFTPBP07988 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.46□□□□□ -0.41
SFTPBP07988 AC009542.2-202ENST00000619004 1067 ntBASIC12.46□□□□□ -0.41
SFTPBP07988 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.46□□□□□ -0.41
SFTPBP07988 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SFTPBP07988 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SFTPBP07988 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.46□□□□□ -0.42
SFTPBP07988 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.42
SFTPBP07988 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.46□□□□□ -0.42
SFTPBP07988 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SFTPBP07988 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.46□□□□□ -0.42
SFTPBP07988 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SFTPBP07988 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
SFTPBP07988 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SFTPBP07988 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SFTPBP07988 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SFTPBP07988 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.46□□□□□ -0.42
SFTPBP07988 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
SFTPBP07988 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SFTPBP07988 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SFTPBP07988 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SFTPBP07988 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.46□□□□□ -0.42
SFTPBP07988 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.45□□□□□ -0.42
SFTPBP07988 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
SFTPBP07988 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.45□□□□□ -0.42
SFTPBP07988 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
SFTPBP07988 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SFTPBP07988 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SFTPBP07988 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SFTPBP07988 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.45□□□□□ -0.42
SFTPBP07988 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.45□□□□□ -0.42
SFTPBP07988 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.45□□□□□ -0.42
SFTPBP07988 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.45□□□□□ -0.42
SFTPBP07988 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 AC010328.2-201ENST00000597698 1111 ntBASIC12.45□□□□□ -0.42
SFTPBP07988 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.45□□□□□ -0.42
SFTPBP07988 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.45□□□□□ -0.42
SFTPBP07988 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.45□□□□□ -0.42
SFTPBP07988 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
SFTPBP07988 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.45□□□□□ -0.42
SFTPBP07988 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 AC090643.2-201ENST00000623442 2029 ntBASIC12.45□□□□□ -0.42
SFTPBP07988 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms