Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.71□□□□□ -0.37
ZIC3O60481 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.71□□□□□ -0.37
ZIC3O60481 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.71□□□□□ -0.37
ZIC3O60481 AC145285.5-201ENST00000562217 361 ntBASIC12.71□□□□□ -0.37
ZIC3O60481 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 AC084781.1-201ENST00000613737 656 ntBASIC12.71□□□□□ -0.37
ZIC3O60481 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ZIC3O60481 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 TBC1D27-202ENST00000424239 1573 ntBASIC12.71□□□□□ -0.37
ZIC3O60481 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.71□□□□□ -0.38
ZIC3O60481 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ZIC3O60481 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZIC3O60481 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
ZIC3O60481 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZIC3O60481 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZIC3O60481 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.71□□□□□ -0.38
ZIC3O60481 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.71□□□□□ -0.38
ZIC3O60481 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ZIC3O60481 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZIC3O60481 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.71□□□□□ -0.38
ZIC3O60481 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.71□□□□□ -0.38
ZIC3O60481 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZIC3O60481 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZIC3O60481 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.71□□□□□ -0.38
ZIC3O60481 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
ZIC3O60481 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZIC3O60481 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
ZIC3O60481 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
ZIC3O60481 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.71□□□□□ -0.38
ZIC3O60481 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZIC3O60481 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.71□□□□□ -0.38
ZIC3O60481 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ZIC3O60481 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.7□□□□□ -0.38
ZIC3O60481 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.7□□□□□ -0.38
ZIC3O60481 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.7□□□□□ -0.38
ZIC3O60481 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.7□□□□□ -0.38
ZIC3O60481 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
ZIC3O60481 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.7□□□□□ -0.38
ZIC3O60481 AC006480.2-201ENST00000609770 1337 ntBASIC12.7□□□□□ -0.38
ZIC3O60481 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ZIC3O60481 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 AC008620.2-201ENST00000510294 1569 ntBASIC12.7□□□□□ -0.38
ZIC3O60481 AC011474.4-201ENST00000623523 2076 ntBASIC12.7□□□□□ -0.38
ZIC3O60481 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.7□□□□□ -0.38
ZIC3O60481 AC092506.1-202ENST00000401022 528 ntBASIC12.7□□□□□ -0.38
ZIC3O60481 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 AK2P2-201ENST00000439142 405 ntBASIC12.7□□□□□ -0.38
ZIC3O60481 NOC2LP1-201ENST00000450578 752 ntBASIC12.7□□□□□ -0.38
ZIC3O60481 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.7□□□□□ -0.38
ZIC3O60481 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.7□□□□□ -0.38
ZIC3O60481 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.7□□□□□ -0.38
ZIC3O60481 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.7□□□□□ -0.38
ZIC3O60481 AC138701.2-201ENST00000553634 226 ntBASIC12.7□□□□□ -0.38
ZIC3O60481 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.7□□□□□ -0.38
ZIC3O60481 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.7□□□□□ -0.38
ZIC3O60481 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.7□□□□□ -0.38
ZIC3O60481 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.7□□□□□ -0.38
ZIC3O60481 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.7□□□□□ -0.38
ZIC3O60481 CR392039.2-201ENST00000623182 509 ntBASIC12.7□□□□□ -0.38
ZIC3O60481 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.7□□□□□ -0.38
ZIC3O60481 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.7□□□□□ -0.38
ZIC3O60481 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
ZIC3O60481 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
ZIC3O60481 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ZIC3O60481 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.7□□□□□ -0.38
ZIC3O60481 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.7□□□□□ -0.38
ZIC3O60481 AC138761.6-201ENST00000583997 1423 ntBASIC12.7□□□□□ -0.38
ZIC3O60481 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
ZIC3O60481 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.7□□□□□ -0.38
ZIC3O60481 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZIC3O60481 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms