Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 AC016700.1-201ENST00000429424 312 ntBASIC12.51□□□□□ -0.41
NPIPB4C9JG80 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 AC007279.1-201ENST00000448547 837 ntBASIC12.51□□□□□ -0.41
NPIPB4C9JG80 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 CR383656.2-201ENST00000548656 2254 ntBASIC12.5□□□□□ -0.41
NPIPB4C9JG80 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 AL596276.2-201ENST00000447525 331 ntBASIC12.5□□□□□ -0.41
NPIPB4C9JG80 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 AL451050.2-201ENST00000606967 682 ntBASIC12.5□□□□□ -0.41
NPIPB4C9JG80 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 KRT8P43-201ENST00000406052 1458 ntBASIC12.5□□□□□ -0.41
NPIPB4C9JG80 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 AL157791.1-201ENST00000553667 1699 ntBASIC12.5□□□□□ -0.41
NPIPB4C9JG80 ZNF493-208ENST00000599461 1769 ntBASIC12.5□□□□□ -0.41
NPIPB4C9JG80 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPB4C9JG80 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms