Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL391903.1-201ENST00000407513 365 ntBASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 IL6RP1-201ENST00000417848 1273 ntBASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 RN7SL477P-201ENST00000488440 286 ntBASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 HNRNPA1P11-201ENST00000580106 956 ntBASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 PDLIM1P1-201ENST00000604187 969 ntBASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 AC099552.4-201ENST00000624248 949 ntBASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 AC068760.1-201ENST00000493579 1953 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 TCAF2P1-201ENST00000291129 2421 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 AL118508.1-201ENST00000613502 2345 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 PMF1-201ENST00000368273 884 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 SOD1-202ENST00000389995 865 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 POLR3DP1-201ENST00000398689 1176 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 AP001331.1-201ENST00000413008 1015 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 RN7SL148P-201ENST00000467120 279 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 RN7SL22P-201ENST00000471800 269 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 KRT127P-201ENST00000547183 433 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 BCAR1P1-201ENST00000553953 636 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 NEMF-210ENST00000556672 590 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 PSME3-213ENST00000592169 826 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 AC244097.1-201ENST00000621631 1216 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 AC073592.10-201ENST00000624789 597 ntBASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM88BA6NKF7 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms