Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RPL29P2-201ENST00000488409 460 ntBASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 GPX3-202ENST00000517973 612 ntTSL 3 BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 RN7SL605P-201ENST00000577229 281 ntBASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 LILRP2-202ENST00000413572 1383 ntBASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 NME1-209ENST00000511355 1645 ntTSL 5 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SHANK2Q9UPX8 AC008536.3-201ENST00000623282 1599 ntBASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 U73169.1-201ENST00000395152 367 ntBASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 HNRNPA1P16-201ENST00000575692 955 ntBASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 MIR5091-201ENST00000578707 93 ntBASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 RN7SL162P-201ENST00000579233 292 ntBASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 AC123912.6-201ENST00000612657 315 ntBASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 AP000437.1-201ENST00000624057 2085 ntBASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC20.4■□□□□ 0.86
SHANK2Q9UPX8 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SHANK2Q9UPX8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SHANK2Q9UPX8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SHANK2Q9UPX8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 SLC9A7P1-201ENST00000554295 3311 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 HNRNPA1P10-201ENST00000444945 962 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 MTHFD2P7-201ENST00000483867 983 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 PIGCP1-201ENST00000527583 895 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 URB1-AS1-201ENST00000534991 831 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 PHBP18-201ENST00000546648 813 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 AC084262.1-201ENST00000567818 751 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 CCND3P2-201ENST00000579393 537 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 AL512324.3-201ENST00000619383 882 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 AC020917.4-201ENST00000623994 1999 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 AC090340.1-201ENST00000620778 4980 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 AC012358.2-201ENST00000430010 1434 ntBASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK2Q9UPX8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 HLF-202ENST00000430986 1385 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms