Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 AC125807.2-201ENST00000513358 3514 ntBASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 AC005229.1-201ENST00000392885 409 ntBASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 AC106820.3-201ENST00000561653 397 ntBASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 AC025279.2-201ENST00000569730 653 ntBASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 BAP1-211ENST00000615113 489 ntBASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 RPSAP52-203ENST00000622976 1023 ntBASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
DNAAF1Q8NEP3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
DNAAF1Q8NEP3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
DNAAF1Q8NEP3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.58□□□□□ -0.39
DNAAF1Q8NEP3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
DNAAF1Q8NEP3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
DNAAF1Q8NEP3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
DNAAF1Q8NEP3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
DNAAF1Q8NEP3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.58□□□□□ -0.39
DNAAF1Q8NEP3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 CD8B2-202ENST00000417670 633 ntBASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 AL161932.2-201ENST00000435436 679 ntBASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 CRB3P1-201ENST00000449338 276 ntBASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 AP001889.1-201ENST00000525414 633 ntBASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 AC027237.1-201ENST00000560942 655 ntBASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 AC008825.2-201ENST00000603374 718 ntBASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 AC009093.10-201ENST00000641956 1442 ntBASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DNAAF1Q8NEP3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms