Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 DUX4L50-201ENST00000455245 715 ntBASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 RN7SL277P-201ENST00000481521 288 ntBASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 MIR4754-201ENST00000582477 89 ntBASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 KRT18P9-201ENST00000604826 1300 ntBASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 AC064801.2-201ENST00000625052 1303 ntBASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 AP002353.1-201ENST00000528257 1599 ntBASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM48Q8IWZ4 FAM90A2P-201ENST00000511144 1395 ntBASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 FAM90A25P-201ENST00000528404 1395 ntBASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AC026320.2-201ENST00000434379 478 ntBASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AC234782.1-201ENST00000451950 919 ntBASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AC242376.1-201ENST00000559033 726 ntBASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 MIR3907-201ENST00000579424 151 ntBASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AC084346.2-201ENST00000607097 949 ntBASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AC079336.7-201ENST00000623428 1078 ntBASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AL359183.1-201ENST00000623796 2132 ntBASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 AC011498.7-201ENST00000624986 2027 ntBASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM48Q8IWZ4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM48Q8IWZ4 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms