Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 MIR326-201ENST00000362220 95 ntBASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 KRT43P-201ENST00000434019 910 ntBASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 AL355994.2-201ENST00000447882 704 ntBASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 AP005018.1-201ENST00000525475 301 ntBASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 AL596325.1-201ENST00000563991 1082 ntBASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC50Q8IVM0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 IGHV3-72-202ENST00000621503 303 ntBASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AL358472.5-202ENST00000641448 1267 ntBASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AC068760.1-201ENST00000493579 1953 ntBASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AHCYP2-201ENST00000430630 1300 ntBASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC50Q8IVM0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms