Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 KRT18P8-201ENST00000581937 1246 ntBASIC14.03□□□□□ -0.16
CDKL1Q00532 MIR4259-201ENST00000584466 101 ntBASIC14.03□□□□□ -0.16
CDKL1Q00532 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 AC007952.5-201ENST00000572818 1486 ntBASIC14.03□□□□□ -0.16
CDKL1Q00532 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CDKL1Q00532 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CDKL1Q00532 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CDKL1Q00532 AC072061.1-201ENST00000569710 2234 ntBASIC14.03□□□□□ -0.16
CDKL1Q00532 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CDKL1Q00532 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKL1Q00532 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKL1Q00532 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CDKL1Q00532 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
CDKL1Q00532 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
CDKL1Q00532 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKL1Q00532 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.02□□□□□ -0.16
CDKL1Q00532 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CDKL1Q00532 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.02□□□□□ -0.16
CDKL1Q00532 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKL1Q00532 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.02□□□□□ -0.16
CDKL1Q00532 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.02□□□□□ -0.16
CDKL1Q00532 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKL1Q00532 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKL1Q00532 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKL1Q00532 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.02□□□□□ -0.16
CDKL1Q00532 CCT8L1P-201ENST00000465400 1674 ntBASIC14.02□□□□□ -0.16
CDKL1Q00532 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKL1Q00532 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CDKL1Q00532 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.02□□□□□ -0.16
CDKL1Q00532 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKL1Q00532 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CDKL1Q00532 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKL1Q00532 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKL1Q00532 BTBD6P1-201ENST00000412176 1267 ntBASIC14.02□□□□□ -0.17
CDKL1Q00532 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.02□□□□□ -0.17
CDKL1Q00532 XBP1P1-201ENST00000436573 652 ntBASIC14.02□□□□□ -0.17
CDKL1Q00532 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CDKL1Q00532 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.02□□□□□ -0.17
CDKL1Q00532 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.02□□□□□ -0.17
CDKL1Q00532 AC009542.2-202ENST00000619004 1067 ntBASIC14.02□□□□□ -0.17
CDKL1Q00532 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.02□□□□□ -0.17
CDKL1Q00532 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDKL1Q00532 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.02□□□□□ -0.17
CDKL1Q00532 AP002761.4-201ENST00000565433 3361 ntBASIC14.02□□□□□ -0.17
CDKL1Q00532 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CDKL1Q00532 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CDKL1Q00532 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKL1Q00532 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDKL1Q00532 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.02□□□□□ -0.17
CDKL1Q00532 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.02□□□□□ -0.17
CDKL1Q00532 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
CDKL1Q00532 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CDKL1Q00532 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKL1Q00532 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKL1Q00532 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKL1Q00532 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.01□□□□□ -0.17
CDKL1Q00532 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.01□□□□□ -0.17
CDKL1Q00532 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.01□□□□□ -0.17
CDKL1Q00532 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.01□□□□□ -0.17
CDKL1Q00532 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CDKL1Q00532 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDKL1Q00532 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CDKL1Q00532 FAM90A7P-201ENST00000382628 1395 ntBASIC14.01□□□□□ -0.17
CDKL1Q00532 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 FAM90A23P-201ENST00000400136 1395 ntBASIC14.01□□□□□ -0.17
CDKL1Q00532 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 SHMT1P1-201ENST00000419974 1312 ntBASIC14.01□□□□□ -0.17
CDKL1Q00532 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.01□□□□□ -0.17
CDKL1Q00532 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.01□□□□□ -0.17
CDKL1Q00532 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDKL1Q00532 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.01□□□□□ -0.17
CDKL1Q00532 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDKL1Q00532 VDAC1P1-201ENST00000439229 848 ntBASIC14.01□□□□□ -0.17
CDKL1Q00532 OR2R1P-201ENST00000441404 914 ntBASIC14.01□□□□□ -0.17
CDKL1Q00532 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.01□□□□□ -0.17
CDKL1Q00532 AC021723.1-201ENST00000486306 515 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms