Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNA5-8SN1-201ENST00000610460 153 ntBASIC10.1□□□□□ -0.79
RPL39P62891 RNA5-8SN5-202ENST00000612463 153 ntBASIC10.1□□□□□ -0.79
RPL39P62891 RNA5-8SN4-201ENST00000613359 153 ntBASIC10.1□□□□□ -0.79
RPL39P62891 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC10.1□□□□□ -0.79
RPL39P62891 AL390754.1-201ENST00000619088 582 ntBASIC10.1□□□□□ -0.79
RPL39P62891 RNA5-8SN5-201ENST00000619471 153 ntBASIC10.1□□□□□ -0.79
RPL39P62891 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 PDIA3P1-201ENST00000471856 1510 ntBASIC10.1□□□□□ -0.79
RPL39P62891 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
RPL39P62891 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC10.09□□□□□ -0.79
RPL39P62891 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.09□□□□□ -0.79
RPL39P62891 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC10.09□□□□□ -0.79
RPL39P62891 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 AL021155.1-201ENST00000438808 2637 ntBASIC10.09□□□□□ -0.79
RPL39P62891 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC10.09□□□□□ -0.79
RPL39P62891 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 USP31-203ENST00000567975 2142 ntTSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC10.09□□□□□ -0.79
RPL39P62891 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.09□□□□□ -0.79
RPL39P62891 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC10.09□□□□□ -0.79
RPL39P62891 AL442647.2-201ENST00000429864 857 ntBASIC10.09□□□□□ -0.79
RPL39P62891 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 AC245100.3-201ENST00000441281 285 ntBASIC10.09□□□□□ -0.79
RPL39P62891 FAM86GP-201ENST00000448322 971 ntBASIC10.09□□□□□ -0.79
RPL39P62891 AL391280.1-201ENST00000506969 1062 ntBASIC10.09□□□□□ -0.79
RPL39P62891 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC10.09□□□□□ -0.79
RPL39P62891 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC10.09□□□□□ -0.79
RPL39P62891 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
RPL39P62891 RRP7BP-205ENST00000566851 833 ntBASIC10.09□□□□□ -0.79
RPL39P62891 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC10.09□□□□□ -0.79
RPL39P62891 AC015911.4-201ENST00000588022 1070 ntBASIC10.09□□□□□ -0.79
RPL39P62891 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC10.09□□□□□ -0.79
RPL39P62891 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC10.09□□□□□ -0.79
RPL39P62891 AC138466.3-201ENST00000619983 221 ntBASIC10.09□□□□□ -0.79
RPL39P62891 AC005252.2-201ENST00000624630 1141 ntBASIC10.09□□□□□ -0.79
RPL39P62891 AC134684.3-201ENST00000641758 218 ntBASIC10.09□□□□□ -0.79
RPL39P62891 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC10.09□□□□□ -0.79
RPL39P62891 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC10.09□□□□□ -0.79
RPL39P62891 PPP1R26P2-201ENST00000611403 3595 ntBASIC10.09□□□□□ -0.79
RPL39P62891 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
RPL39P62891 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RPL39P62891 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms