Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLDN6P56747 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 AC106827.1-201ENST00000366454 431 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CLDN6P56747 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 KRT8P18-201ENST00000413425 1445 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.6□□□□□ -0.23
CLDN6P56747 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 GRPEL2P1-201ENST00000453145 339 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN6P56747 AC006529.1-201ENST00000459978 637 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CLDN6P56747 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.6□□□□□ -0.23
CLDN6P56747 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 ALG1L3P-201ENST00000503331 765 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.6□□□□□ -0.23
CLDN6P56747 RN7SKP155-201ENST00000516031 288 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 AC090136.2-201ENST00000517809 420 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 KRT18P37-201ENST00000520711 1282 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN6P56747 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN6P56747 AL132994.1-201ENST00000554098 400 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.6□□□□□ -0.23
CLDN6P56747 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC13.6□□□□□ -0.23
CLDN6P56747 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 CYP4F36P-201ENST00000589193 186 ntBASIC13.6□□□□□ -0.23
CLDN6P56747 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN6P56747 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN6P56747 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN6P56747 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 AL109809.1-201ENST00000418979 1367 ntBASIC13.59□□□□□ -0.23
CLDN6P56747 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 AC019109.1-201ENST00000401725 1874 ntBASIC13.59□□□□□ -0.23
CLDN6P56747 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 SNX18-202ENST00000343017 3140 ntBASIC13.59□□□□□ -0.23
CLDN6P56747 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.59□□□□□ -0.23
CLDN6P56747 RN7SL288P-201ENST00000490496 291 ntBASIC13.59□□□□□ -0.23
CLDN6P56747 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 RBM4-207ENST00000506523 654 ntTSL 3 BASIC13.59□□□□□ -0.23
CLDN6P56747 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC13.59□□□□□ -0.23
CLDN6P56747 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC13.59□□□□□ -0.23
CLDN6P56747 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.59□□□□□ -0.23
CLDN6P56747 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 AL160191.2-201ENST00000603975 601 ntBASIC13.59□□□□□ -0.23
CLDN6P56747 ODCP-201ENST00000459650 1639 ntBASIC13.59□□□□□ -0.23
CLDN6P56747 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.59□□□□□ -0.23
CLDN6P56747 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 AC004554.1-201ENST00000422830 1468 ntBASIC13.59□□□□□ -0.23
CLDN6P56747 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 AL365181.1-201ENST00000564032 1828 ntBASIC13.59□□□□□ -0.23
CLDN6P56747 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CLDN6P56747 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN6P56747 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms