Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VARSP26640 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VARSP26640 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 AC015818.8-201ENST00000587907 1519 ntBASIC14.12□□□□□ -0.15
VARSP26640 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VARSP26640 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.12□□□□□ -0.15
VARSP26640 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.12□□□□□ -0.15
VARSP26640 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VARSP26640 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.12□□□□□ -0.15
VARSP26640 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.12□□□□□ -0.15
VARSP26640 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.12□□□□□ -0.15
VARSP26640 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC14.12□□□□□ -0.15
VARSP26640 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.12□□□□□ -0.15
VARSP26640 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC14.12□□□□□ -0.15
VARSP26640 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.12□□□□□ -0.15
VARSP26640 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 EEF1DP1-201ENST00000585891 896 ntBASIC14.12□□□□□ -0.15
VARSP26640 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 AC008825.2-201ENST00000603374 718 ntBASIC14.12□□□□□ -0.15
VARSP26640 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VARSP26640 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VARSP26640 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.12□□□□□ -0.15
VARSP26640 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VARSP26640 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VARSP26640 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VARSP26640 AC106818.1-201ENST00000623223 3242 ntBASIC14.12□□□□□ -0.15
VARSP26640 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VARSP26640 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VARSP26640 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VARSP26640 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VARSP26640 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 BEND3P3-201ENST00000611030 2440 ntBASIC14.11□□□□□ -0.15
VARSP26640 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.11□□□□□ -0.15
VARSP26640 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VARSP26640 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC14.11□□□□□ -0.15
VARSP26640 AL008707.1-201ENST00000422498 534 ntBASIC14.11□□□□□ -0.15
VARSP26640 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 MTX1P1-201ENST00000440904 838 ntBASIC14.11□□□□□ -0.15
VARSP26640 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.11□□□□□ -0.15
VARSP26640 AL591846.1-201ENST00000451736 433 ntBASIC14.11□□□□□ -0.15
VARSP26640 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.11□□□□□ -0.15
VARSP26640 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.11□□□□□ -0.15
VARSP26640 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.11□□□□□ -0.15
VARSP26640 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 RNA5SP423-201ENST00000517127 109 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms