Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COL9A1P20849 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.51□□□□□ -0.09
COL9A1P20849 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.51□□□□□ -0.09
COL9A1P20849 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.51□□□□□ -0.09
COL9A1P20849 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
COL9A1P20849 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 RNVU1-8-201ENST00000364272 125 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 VN1R11P-201ENST00000407795 868 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 TPT1P9-201ENST00000413759 514 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC14.51□□□□□ -0.09
COL9A1P20849 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC14.51□□□□□ -0.09
COL9A1P20849 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC14.51□□□□□ -0.09
COL9A1P20849 AC092903.1-201ENST00000466506 262 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC14.51□□□□□ -0.09
COL9A1P20849 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.51□□□□□ -0.09
COL9A1P20849 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC14.51□□□□□ -0.09
COL9A1P20849 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC14.51□□□□□ -0.09
COL9A1P20849 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC14.51□□□□□ -0.09
COL9A1P20849 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.51□□□□□ -0.09
COL9A1P20849 RN7SL665P-201ENST00000578793 300 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 MIR4746-201ENST00000579802 71 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC14.51□□□□□ -0.09
COL9A1P20849 RN7SL827P-201ENST00000607480 288 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC14.51□□□□□ -0.09
COL9A1P20849 AC069503.1-202ENST00000616576 642 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 AC090386.2-201ENST00000623010 1039 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC14.51□□□□□ -0.09
COL9A1P20849 BX322534.1-201ENST00000635574 241 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 AC215524.1-201ENST00000635696 241 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.51□□□□□ -0.09
COL9A1P20849 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.51□□□□□ -0.09
COL9A1P20849 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.51□□□□□ -0.09
COL9A1P20849 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COL9A1P20849 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.51□□□□□ -0.09
COL9A1P20849 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL9A1P20849 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL9A1P20849 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL9A1P20849 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL9A1P20849 TCAF2P1-201ENST00000291129 2421 ntBASIC14.51□□□□□ -0.09
COL9A1P20849 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.51□□□□□ -0.09
COL9A1P20849 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC14.5□□□□□ -0.09
COL9A1P20849 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.5□□□□□ -0.09
COL9A1P20849 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.5□□□□□ -0.09
COL9A1P20849 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
COL9A1P20849 AC097474.1-201ENST00000506481 1371 ntBASIC14.5□□□□□ -0.09
COL9A1P20849 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.5□□□□□ -0.09
COL9A1P20849 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
COL9A1P20849 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.5□□□□□ -0.09
COL9A1P20849 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.5□□□□□ -0.09
COL9A1P20849 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 MIR645-201ENST00000385283 94 ntBASIC14.5□□□□□ -0.09
COL9A1P20849 TUBB2BP1-201ENST00000404155 871 ntBASIC14.5□□□□□ -0.09
COL9A1P20849 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC14.5□□□□□ -0.09
COL9A1P20849 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.5□□□□□ -0.09
COL9A1P20849 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC14.5□□□□□ -0.09
COL9A1P20849 MTCYBP32-201ENST00000427945 1084 ntBASIC14.5□□□□□ -0.09
COL9A1P20849 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.5□□□□□ -0.09
COL9A1P20849 MTCYBP15-201ENST00000433123 1127 ntBASIC14.5□□□□□ -0.09
COL9A1P20849 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.5□□□□□ -0.09
COL9A1P20849 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.5□□□□□ -0.09
COL9A1P20849 AL022319.1-201ENST00000458183 1167 ntBASIC14.5□□□□□ -0.09
COL9A1P20849 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.5□□□□□ -0.09
COL9A1P20849 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL9A1P20849 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC14.5□□□□□ -0.09
COL9A1P20849 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.5□□□□□ -0.09
COL9A1P20849 AC114322.1-201ENST00000506771 926 ntBASIC14.5□□□□□ -0.09
COL9A1P20849 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC14.5□□□□□ -0.09
COL9A1P20849 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC14.5□□□□□ -0.09
COL9A1P20849 AP003041.2-201ENST00000525666 1180 ntBASIC14.5□□□□□ -0.09
COL9A1P20849 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC14.5□□□□□ -0.09
COL9A1P20849 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC14.5□□□□□ -0.09
COL9A1P20849 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms