Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 AC103724.2-201ENST00000520355 476 ntBASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.62■□□□□ 0.41
SHANK3Q9BYB0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 TUBB2BP1-201ENST00000404155 871 ntBASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 RPE-208ENST00000436630 1128 ntTSL 2 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AL161727.1-201ENST00000457409 530 ntBASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 BICD1P1-201ENST00000457832 1222 ntBASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 CDC37P2-201ENST00000562287 1029 ntBASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 MFSD12-215ENST00000615613 688 ntBASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AL590556.2-202ENST00000636906 844 ntBASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 SRL-202ENST00000537996 1814 ntTSL 2 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 TULP3P1-202ENST00000453253 1291 ntBASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHANK3Q9BYB0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 GBAP1-208ENST00000566701 1546 ntBASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 ATF4P4-201ENST00000393544 1930 ntBASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 PMF1-201ENST00000368273 884 ntTSL 2 BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 CRIP1P2-201ENST00000425396 228 ntBASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SHANK3Q9BYB0 AC104115.1-201ENST00000484005 623 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms