Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.58□□□□□ -0.24
CGREF1Q99674 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CGREF1Q99674 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.58□□□□□ -0.24
CGREF1Q99674 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.58□□□□□ -0.24
CGREF1Q99674 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.58□□□□□ -0.24
CGREF1Q99674 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 KRT18P15-201ENST00000458108 1291 ntBASIC13.58□□□□□ -0.24
CGREF1Q99674 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.58□□□□□ -0.24
CGREF1Q99674 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.58□□□□□ -0.24
CGREF1Q99674 AP001889.1-201ENST00000525414 633 ntBASIC13.58□□□□□ -0.24
CGREF1Q99674 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.58□□□□□ -0.24
CGREF1Q99674 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.58□□□□□ -0.24
CGREF1Q99674 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.58□□□□□ -0.24
CGREF1Q99674 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.58□□□□□ -0.24
CGREF1Q99674 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CGREF1Q99674 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CGREF1Q99674 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CGREF1Q99674 AC010319.3-201ENST00000597028 470 ntBASIC13.58□□□□□ -0.24
CGREF1Q99674 AC021016.3-201ENST00000608367 477 ntBASIC13.58□□□□□ -0.24
CGREF1Q99674 LAP3P2-201ENST00000454686 1454 ntBASIC13.58□□□□□ -0.24
CGREF1Q99674 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.58□□□□□ -0.24
CGREF1Q99674 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CGREF1Q99674 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.58□□□□□ -0.24
CGREF1Q99674 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.58□□□□□ -0.24
CGREF1Q99674 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CGREF1Q99674 PCDHA6-201ENST00000378126 3267 ntBASIC13.58□□□□□ -0.24
CGREF1Q99674 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.57□□□□□ -0.24
CGREF1Q99674 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.57□□□□□ -0.24
CGREF1Q99674 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.57□□□□□ -0.24
CGREF1Q99674 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CGREF1Q99674 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CGREF1Q99674 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CGREF1Q99674 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 AC061965.1-201ENST00000560524 1465 ntBASIC13.57□□□□□ -0.24
CGREF1Q99674 AC024075.2-201ENST00000598112 1473 ntBASIC13.57□□□□□ -0.24
CGREF1Q99674 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.57□□□□□ -0.24
CGREF1Q99674 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.57□□□□□ -0.24
CGREF1Q99674 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CGREF1Q99674 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CGREF1Q99674 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 AC010141.1-201ENST00000411585 623 ntBASIC13.57□□□□□ -0.24
CGREF1Q99674 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.57□□□□□ -0.24
CGREF1Q99674 AL355864.2-201ENST00000447420 863 ntBASIC13.57□□□□□ -0.24
CGREF1Q99674 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
CGREF1Q99674 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.57□□□□□ -0.24
CGREF1Q99674 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.57□□□□□ -0.24
CGREF1Q99674 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.57□□□□□ -0.24
CGREF1Q99674 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CGREF1Q99674 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.57□□□□□ -0.24
CGREF1Q99674 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.57□□□□□ -0.24
CGREF1Q99674 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.57□□□□□ -0.24
CGREF1Q99674 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 RN7SL713P-201ENST00000582127 302 ntBASIC13.57□□□□□ -0.24
CGREF1Q99674 AC073413.1-201ENST00000603927 732 ntBASIC13.57□□□□□ -0.24
CGREF1Q99674 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.57□□□□□ -0.24
CGREF1Q99674 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.57□□□□□ -0.24
CGREF1Q99674 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CGREF1Q99674 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CGREF1Q99674 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.57□□□□□ -0.24
CGREF1Q99674 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CGREF1Q99674 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CGREF1Q99674 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CGREF1Q99674 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms