Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
AP3S1Q92572 AC009093.10-201ENST00000641956 1442 ntBASIC12.57□□□□□ -0.4
AP3S1Q92572 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 RN7SKP230-201ENST00000365642 335 ntBASIC12.57□□□□□ -0.4
AP3S1Q92572 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.57□□□□□ -0.4
AP3S1Q92572 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.57□□□□□ -0.4
AP3S1Q92572 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.57□□□□□ -0.4
AP3S1Q92572 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 ALG3P1-201ENST00000508806 1114 ntBASIC12.57□□□□□ -0.4
AP3S1Q92572 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.57□□□□□ -0.4
AP3S1Q92572 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.57□□□□□ -0.4
AP3S1Q92572 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.57□□□□□ -0.4
AP3S1Q92572 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
AP3S1Q92572 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.57□□□□□ -0.4
AP3S1Q92572 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.57□□□□□ -0.4
AP3S1Q92572 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.57□□□□□ -0.4
AP3S1Q92572 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
AP3S1Q92572 AC140113.2-201ENST00000604370 208 ntBASIC12.57□□□□□ -0.4
AP3S1Q92572 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.57□□□□□ -0.4
AP3S1Q92572 TEX28P1-201ENST00000613479 1221 ntBASIC12.57□□□□□ -0.4
AP3S1Q92572 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
AP3S1Q92572 TEX28P2-201ENST00000617764 1221 ntBASIC12.57□□□□□ -0.4
AP3S1Q92572 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.57□□□□□ -0.4
AP3S1Q92572 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.57□□□□□ -0.4
AP3S1Q92572 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 AC012531.1-201ENST00000562848 2680 ntBASIC12.57□□□□□ -0.4
AP3S1Q92572 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
AP3S1Q92572 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S1Q92572 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.57□□□□□ -0.4
AP3S1Q92572 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 AC022497.1-201ENST00000624916 3691 ntBASIC12.56□□□□□ -0.4
AP3S1Q92572 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
AP3S1Q92572 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 EIF3FP3-201ENST00000434851 1086 ntBASIC12.56□□□□□ -0.4
AP3S1Q92572 PUDPP3-201ENST00000445368 636 ntBASIC12.56□□□□□ -0.4
AP3S1Q92572 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 INE1-201ENST00000456273 945 ntBASIC12.56□□□□□ -0.4
AP3S1Q92572 FAM86LP-201ENST00000478302 853 ntBASIC12.56□□□□□ -0.4
AP3S1Q92572 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.56□□□□□ -0.4
AP3S1Q92572 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.56□□□□□ -0.4
AP3S1Q92572 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.56□□□□□ -0.4
AP3S1Q92572 AC007431.3-201ENST00000623221 587 ntBASIC12.56□□□□□ -0.4
AP3S1Q92572 AC002472.3-201ENST00000640124 621 ntBASIC12.56□□□□□ -0.4
AP3S1Q92572 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 SALL4P6-201ENST00000429385 1691 ntBASIC12.56□□□□□ -0.4
AP3S1Q92572 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 AL645937.6-201ENST00000641122 3727 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms