Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 SLC25A24P2-201ENST00000415059 510 ntBASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 AC005014.1-201ENST00000432006 2976 ntBASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 AC011742.3-201ENST00000439053 820 ntBASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 RCC2P8-201ENST00000502779 1035 ntBASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 AC093752.3-201ENST00000567343 901 ntBASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 AL021578.1-201ENST00000613646 709 ntBASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 CR392039.2-201ENST00000623182 509 ntBASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 AC068760.1-201ENST00000493579 1953 ntBASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 AGAP12P-201ENST00000585227 2359 ntBASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 SBF1P1-201ENST00000444527 5631 ntBASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 CICP17-201ENST00000418553 2377 ntBASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 AC005077.2-201ENST00000449786 690 ntBASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 EIF4HP1-201ENST00000453115 687 ntBASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 AC125604.1-201ENST00000496255 707 ntBASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 MIR3188-201ENST00000583494 85 ntBASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 AL022334.2-201ENST00000610000 484 ntBASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 LINC01165-201ENST00000445190 1623 ntBASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms