Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 AK2P2-201ENST00000439142 405 ntBASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 FTLP1-201ENST00000449155 526 ntBASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 MIR2392-201ENST00000584881 84 ntBASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 AC025262.2-201ENST00000623975 1056 ntBASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 AC074138.1-201ENST00000611182 1303 ntBASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 TBC1D27-202ENST00000424239 1573 ntBASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 LINC02486-201ENST00000604157 3000 ntBASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 AC004554.1-201ENST00000422830 1468 ntBASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 AC061965.1-201ENST00000560524 1465 ntBASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 MIR33B-201ENST00000385104 96 ntBASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 HLA-DMA-203ENST00000395305 777 ntBASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 GUSBP10-201ENST00000417412 665 ntBASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 RPL17P45-201ENST00000586289 509 ntBASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 AC073352.2-201ENST00000609385 439 ntBASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 AC006480.2-201ENST00000609770 1337 ntBASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ARHGEF39Q8N4T4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms