Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 AL365181.3-201ENST00000605886 3222 ntBASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 PSAT1P2-201ENST00000426107 972 ntBASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 LDHBP1-201ENST00000455730 1119 ntBASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 POU5F1P2-201ENST00000521750 823 ntBASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 AP001505.2-201ENST00000616815 443 ntBASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 SHMT1P1-201ENST00000419974 1312 ntBASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 OR8T1P-201ENST00000421347 918 ntBASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AC073150.1-201ENST00000450406 1084 ntBASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AC024681.1-201ENST00000521917 487 ntBASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 MIR6769A-201ENST00000617340 73 ntBASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms