Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 LAP3P2-201ENST00000454686 1454 ntBASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 AC083964.2-201ENST00000623988 2396 ntBASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 POU5F1P2-201ENST00000521750 823 ntBASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AC134698.3-201ENST00000523880 214 ntBASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 MIR3188-201ENST00000583494 85 ntBASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AL109837.1-201ENST00000603272 613 ntBASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AC012044.1-201ENST00000603431 297 ntBASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AL353770.1-201ENST00000614915 403 ntBASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AL591471.1-201ENST00000621855 229 ntBASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AC090386.2-201ENST00000623010 1039 ntBASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.87□□□□□ -0.03
RFWD3Q6PCD5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 AC007274.2-201ENST00000421675 662 ntBASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms