Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 AL031587.5-201ENST00000624344 1849 ntBASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42BPAQ5VT25 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 ZSCAN5DP-201ENST00000600684 1488 ntBASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 OR7E12P-201ENST00000344740 973 ntBASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 RNA5SP84-201ENST00000364740 107 ntBASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 RPE-208ENST00000436630 1128 ntTSL 2 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 DDX11L8-201ENST00000535849 366 ntBASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 AP001462.1-201ENST00000594089 452 ntBASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42BPAQ5VT25 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 RBM14-205ENST00000443702 732 ntTSL 3 BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 AC113398.1-201ENST00000464124 406 ntBASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 OR52V1P-201ENST00000515557 898 ntBASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 MARK2P9-201ENST00000430958 1727 ntBASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 AL157832.2-205ENST00000597245 1649 ntBASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDC42BPAQ5VT25 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 SRL-202ENST00000537996 1814 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 RPL14-203ENST00000416518 812 ntTSL 3 BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 RN7SL789P-201ENST00000478944 293 ntBASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 AP001102.1-201ENST00000528959 409 ntBASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 RN7SL480P-201ENST00000581481 294 ntBASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42BPAQ5VT25 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 RN7SKP212-201ENST00000410851 328 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms