Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 AL391647.1-201ENST00000395664 511 ntBASIC18.36■□□□□ 0.53
CCDC27Q2M243 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 SLC25A24P2-201ENST00000415059 510 ntBASIC18.36■□□□□ 0.53
CCDC27Q2M243 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 CAP2P1-201ENST00000557743 1390 ntBASIC18.36■□□□□ 0.53
CCDC27Q2M243 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 AC007326.1-201ENST00000604539 458 ntBASIC18.36■□□□□ 0.53
CCDC27Q2M243 AL365209.1-201ENST00000624418 6473 ntBASIC18.36■□□□□ 0.53
CCDC27Q2M243 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 AC135782.3-201ENST00000562782 2105 ntBASIC18.35■□□□□ 0.53
CCDC27Q2M243 AC020917.4-201ENST00000623994 1999 ntBASIC18.35■□□□□ 0.53
CCDC27Q2M243 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 AC138761.6-201ENST00000583997 1423 ntBASIC18.35■□□□□ 0.53
CCDC27Q2M243 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 STK3-218ENST00000617590 2485 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC27Q2M243 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC27Q2M243 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.34■□□□□ 0.53
CCDC27Q2M243 PHB-210ENST00000511832 1509 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 IMP3P2-201ENST00000489760 475 ntBASIC18.34■□□□□ 0.53
CCDC27Q2M243 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 FGFR3P5-201ENST00000564496 886 ntBASIC18.34■□□□□ 0.53
CCDC27Q2M243 JPT2-214ENST00000569765 782 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 GARS-210ENST00000627489 324 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms