Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 SPDYE19P-201ENST00000338590 713 ntBASIC10.11□□□□□ -0.79
RPL39P62891 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
RPL39P62891 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC10.11□□□□□ -0.79
RPL39P62891 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
RPL39P62891 MIR943-201ENST00000401286 94 ntBASIC10.11□□□□□ -0.79
RPL39P62891 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC10.11□□□□□ -0.79
RPL39P62891 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 AP006288.1-201ENST00000446065 395 ntBASIC10.11□□□□□ -0.79
RPL39P62891 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC10.11□□□□□ -0.79
RPL39P62891 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC10.11□□□□□ -0.79
RPL39P62891 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 KRT18P25-201ENST00000508931 1278 ntBASIC10.11□□□□□ -0.79
RPL39P62891 AC104596.2-201ENST00000512793 793 ntBASIC10.11□□□□□ -0.79
RPL39P62891 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC10.11□□□□□ -0.79
RPL39P62891 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.11□□□□□ -0.79
RPL39P62891 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC10.11□□□□□ -0.79
RPL39P62891 AL359711.2-201ENST00000563105 872 ntBASIC10.11□□□□□ -0.79
RPL39P62891 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.11□□□□□ -0.79
RPL39P62891 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.11□□□□□ -0.79
RPL39P62891 MIR8072-201ENST00000614241 80 ntBASIC10.11□□□□□ -0.79
RPL39P62891 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC10.11□□□□□ -0.79
RPL39P62891 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 AC026271.4-201ENST00000578214 1833 ntBASIC10.11□□□□□ -0.79
RPL39P62891 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
RPL39P62891 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
RPL39P62891 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
RPL39P62891 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
RPL39P62891 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC10.11□□□□□ -0.79
RPL39P62891 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC10.11□□□□□ -0.79
RPL39P62891 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RPL39P62891 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 AC022144.1-201ENST00000602255 1580 ntBASIC10.1□□□□□ -0.79
RPL39P62891 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC10.1□□□□□ -0.79
RPL39P62891 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC10.1□□□□□ -0.79
RPL39P62891 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC10.1□□□□□ -0.79
RPL39P62891 AC067863.1-201ENST00000494933 530 ntBASIC10.1□□□□□ -0.79
RPL39P62891 MESTP3-201ENST00000503460 968 ntBASIC10.1□□□□□ -0.79
RPL39P62891 ALG3P1-201ENST00000508806 1114 ntBASIC10.1□□□□□ -0.79
RPL39P62891 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC10.1□□□□□ -0.79
RPL39P62891 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RPL39P62891 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC10.1□□□□□ -0.79
RPL39P62891 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.1□□□□□ -0.79
RPL39P62891 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC10.1□□□□□ -0.79
RPL39P62891 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms