Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 ZFAT-208ENST00000520356 4273 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 CASP7-211ENST00000621345 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 ZNF526-201ENST00000301215 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 NUTM2A-AS1-205ENST00000420424 2226 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 AP002495.1-204ENST00000529844 1781 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 HOXA-AS3-202ENST00000518947 3992 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 CCDC40-203ENST00000374877 3544 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 DEF8-201ENST00000268676 3725 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 AL359649.1-201ENST00000607406 1741 ntBASIC9.12□□□□□ -0.95
PCP4P48539 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 ST6GALNAC1-201ENST00000156626 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 PDYN-201ENST00000217305 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 TROAP-215ENST00000551245 2771 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 MIR564-202ENST00000385049 94 ntBASIC9.12□□□□□ -0.95
PCP4P48539 MIR762-201ENST00000390236 83 ntBASIC9.12□□□□□ -0.95
PCP4P48539 AC010740.1-201ENST00000417035 684 ntBASIC9.12□□□□□ -0.95
PCP4P48539 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC9.12□□□□□ -0.95
PCP4P48539 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC9.12□□□□□ -0.95
PCP4P48539 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC9.12□□□□□ -0.95
PCP4P48539 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
PCP4P48539 AP000894.1-201ENST00000584430 520 ntBASIC9.12□□□□□ -0.95
PCP4P48539 AL121772.3-201ENST00000610840 674 ntBASIC9.12□□□□□ -0.95
PCP4P48539 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 ALDH1L1-201ENST00000273450 3179 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 SCN4A-201ENST00000435607 7805 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 ARID1B-230ENST00000637810 5073 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 SLC25A19-203ENST00000402418 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 CALML4-204ENST00000448060 2520 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 MYBPC2-201ENST00000357701 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 FOXJ2-202ENST00000428177 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 MAP3K7CL-216ENST00000545939 1407 ntTSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 SLC22A8-210ENST00000545207 1622 ntTSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 MYO7B-201ENST00000409090 3567 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 TGM5-201ENST00000220420 2767 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PCP4P48539 TGM5-205ENST00000610827 2756 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC9.12□□□□□ -0.95
PCP4P48539 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
PCP4P48539 AC007787.1-201ENST00000588095 1583 ntBASIC9.12□□□□□ -0.95
PCP4P48539 DOCK2-201ENST00000256935 6097 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC9.11□□□□□ -0.95
PCP4P48539 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC9.11□□□□□ -0.95
PCP4P48539 PPM1K-210ENST00000608933 6484 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC9.11□□□□□ -0.95
PCP4P48539 AC139491.6-202ENST00000637171 2077 ntBASIC9.11□□□□□ -0.95
PCP4P48539 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC9.11□□□□□ -0.95
PCP4P48539 OXNAD1-201ENST00000285083 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC9.11□□□□□ -0.95
PCP4P48539 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 CASP7-203ENST00000369318 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
PCP4P48539 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC9.11□□□□□ -0.95
PCP4P48539 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.11□□□□□ -0.95
PCP4P48539 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PCP4P48539 DUX4L17-201ENST00000557360 1267 ntBASIC9.11□□□□□ -0.95
PCP4P48539 AC139530.3-201ENST00000620344 690 ntBASIC9.11□□□□□ -0.95
PCP4P48539 EPB41L1-218ENST00000628415 3287 ntTSL 2 BASIC9.11□□□□□ -0.95
PCP4P48539 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms