Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AL391647.1-201ENST00000395664 511 ntBASIC15.63■□□□□ 0.09
KRT9P35527 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
KRT9P35527 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.63■□□□□ 0.09
KRT9P35527 CHMP1AP1-201ENST00000445563 662 ntBASIC15.63■□□□□ 0.09
KRT9P35527 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.63■□□□□ 0.09
KRT9P35527 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.63■□□□□ 0.09
KRT9P35527 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.63■□□□□ 0.09
KRT9P35527 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
KRT9P35527 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.63■□□□□ 0.09
KRT9P35527 AC008687.7-202ENST00000637404 953 ntBASIC15.63■□□□□ 0.09
KRT9P35527 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
KRT9P35527 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.63■□□□□ 0.09
KRT9P35527 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
KRT9P35527 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 AC073869.1-201ENST00000415574 2762 ntBASIC15.63■□□□□ 0.09
KRT9P35527 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
KRT9P35527 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
KRT9P35527 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT9P35527 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
KRT9P35527 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT9P35527 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT9P35527 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 AC079776.1-201ENST00000401540 1152 ntBASIC15.62■□□□□ 0.09
KRT9P35527 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT9P35527 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.62■□□□□ 0.09
KRT9P35527 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.62■□□□□ 0.09
KRT9P35527 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.62■□□□□ 0.09
KRT9P35527 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 AP006547.1-201ENST00000563435 692 ntBASIC15.62■□□□□ 0.09
KRT9P35527 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.62■□□□□ 0.09
KRT9P35527 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.62■□□□□ 0.09
KRT9P35527 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.62■□□□□ 0.09
KRT9P35527 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
KRT9P35527 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 SHC1P1-201ENST00000425230 1745 ntBASIC15.62■□□□□ 0.09
KRT9P35527 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
KRT9P35527 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT9P35527 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
KRT9P35527 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
KRT9P35527 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
KRT9P35527 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC15.61■□□□□ 0.09
KRT9P35527 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC15.61■□□□□ 0.09
KRT9P35527 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
KRT9P35527 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC15.61■□□□□ 0.09
KRT9P35527 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
KRT9P35527 MIR1909-201ENST00000411312 80 ntBASIC15.61■□□□□ 0.09
KRT9P35527 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.61■□□□□ 0.09
KRT9P35527 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.61■□□□□ 0.09
KRT9P35527 GPR53P-205ENST00000457298 1084 ntBASIC15.61■□□□□ 0.09
KRT9P35527 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.61■□□□□ 0.09
KRT9P35527 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.61■□□□□ 0.09
KRT9P35527 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.61■□□□□ 0.09
KRT9P35527 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.61■□□□□ 0.09
KRT9P35527 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.61■□□□□ 0.09
KRT9P35527 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
KRT9P35527 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT9P35527 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms