Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
APOC1P02654 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.7□□□□□ -0.38
APOC1P02654 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 HMGN1P19-201ENST00000436976 333 ntBASIC12.7□□□□□ -0.38
APOC1P02654 FAM58BP-201ENST00000439056 645 ntBASIC12.7□□□□□ -0.38
APOC1P02654 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 HOMER2P2-201ENST00000451621 847 ntBASIC12.7□□□□□ -0.38
APOC1P02654 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.7□□□□□ -0.38
APOC1P02654 MIR4683-201ENST00000579659 81 ntBASIC12.7□□□□□ -0.38
APOC1P02654 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 MAPK10-262ENST00000641051 5738 ntBASIC12.7□□□□□ -0.38
APOC1P02654 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
APOC1P02654 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
APOC1P02654 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.69□□□□□ -0.38
APOC1P02654 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 MIR1202-201ENST00000408529 83 ntBASIC12.69□□□□□ -0.38
APOC1P02654 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.69□□□□□ -0.38
APOC1P02654 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.69□□□□□ -0.38
APOC1P02654 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.69□□□□□ -0.38
APOC1P02654 AP003171.2-201ENST00000528208 925 ntBASIC12.69□□□□□ -0.38
APOC1P02654 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 AC132938.2-201ENST00000579188 680 ntBASIC12.69□□□□□ -0.38
APOC1P02654 PPY2P-201ENST00000582808 702 ntBASIC12.69□□□□□ -0.38
APOC1P02654 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.69□□□□□ -0.38
APOC1P02654 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.69□□□□□ -0.38
APOC1P02654 AC244669.2-201ENST00000612320 853 ntBASIC12.69□□□□□ -0.38
APOC1P02654 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 AL591163.1-201ENST00000641757 987 ntBASIC12.69□□□□□ -0.38
APOC1P02654 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC1P02654 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 KRT8P4-201ENST00000509735 1454 ntBASIC12.69□□□□□ -0.38
APOC1P02654 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC1P02654 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
APOC1P02654 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms