Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
HLA-AP01891 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
HLA-AP01891 AC107375.1-201ENST00000564464 2231 ntBASIC12.1□□□□□ -0.47
HLA-AP01891 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
HLA-AP01891 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.1□□□□□ -0.47
HLA-AP01891 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
HLA-AP01891 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 AC106818.1-201ENST00000623223 3242 ntBASIC12.09□□□□□ -0.47
HLA-AP01891 AC131902.2-201ENST00000566892 2172 ntBASIC12.09□□□□□ -0.47
HLA-AP01891 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.09□□□□□ -0.47
HLA-AP01891 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.09□□□□□ -0.47
HLA-AP01891 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.09□□□□□ -0.47
HLA-AP01891 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.09□□□□□ -0.47
HLA-AP01891 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.09□□□□□ -0.47
HLA-AP01891 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.09□□□□□ -0.47
HLA-AP01891 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
HLA-AP01891 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.09□□□□□ -0.47
HLA-AP01891 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-AP01891 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-AP01891 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
HLA-AP01891 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
HLA-AP01891 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.08□□□□□ -0.48
HLA-AP01891 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
HLA-AP01891 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.08□□□□□ -0.48
HLA-AP01891 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.08□□□□□ -0.48
HLA-AP01891 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-AP01891 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms