Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 AL021155.1-201ENST00000438808 2637 ntBASIC11.29□□□□□ -0.6
IFNA1P01562 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
IFNA1P01562 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.29□□□□□ -0.6
IFNA1P01562 CETN4P-206ENST00000642099 2168 ntBASIC11.29□□□□□ -0.6
IFNA1P01562 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
IFNA1P01562 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.29□□□□□ -0.6
IFNA1P01562 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.29□□□□□ -0.6
IFNA1P01562 FAM58CP-201ENST00000435741 640 ntBASIC11.29□□□□□ -0.6
IFNA1P01562 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.29□□□□□ -0.6
IFNA1P01562 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.29□□□□□ -0.6
IFNA1P01562 AC069335.1-201ENST00000489972 472 ntBASIC11.29□□□□□ -0.6
IFNA1P01562 GCOM2-201ENST00000509133 1104 ntBASIC11.29□□□□□ -0.6
IFNA1P01562 KRT18P35-201ENST00000510488 1269 ntBASIC11.29□□□□□ -0.6
IFNA1P01562 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.29□□□□□ -0.6
IFNA1P01562 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.29□□□□□ -0.6
IFNA1P01562 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.29□□□□□ -0.6
IFNA1P01562 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 AL589739.1-201ENST00000607720 493 ntBASIC11.29□□□□□ -0.6
IFNA1P01562 ARHGEF10-204ENST00000398564 5480 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
IFNA1P01562 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.29□□□□□ -0.6
IFNA1P01562 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.29□□□□□ -0.6
IFNA1P01562 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.29□□□□□ -0.6
IFNA1P01562 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 FAM90A11P-201ENST00000518378 2218 ntBASIC11.29□□□□□ -0.6
IFNA1P01562 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.29□□□□□ -0.6
IFNA1P01562 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
IFNA1P01562 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 AC018445.4-201ENST00000624066 2291 ntBASIC11.28□□□□□ -0.6
IFNA1P01562 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
IFNA1P01562 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 EMBP1-201ENST00000458200 901 ntBASIC11.28□□□□□ -0.6
IFNA1P01562 AC026434.2-201ENST00000506094 1078 ntBASIC11.28□□□□□ -0.6
IFNA1P01562 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.28□□□□□ -0.6
IFNA1P01562 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.28□□□□□ -0.6
IFNA1P01562 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.28□□□□□ -0.6
IFNA1P01562 AC027237.1-201ENST00000560942 655 ntBASIC11.28□□□□□ -0.6
IFNA1P01562 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.28□□□□□ -0.6
IFNA1P01562 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.28□□□□□ -0.6
IFNA1P01562 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 243.8 ms