Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 AL590824.1-201ENST00000403828 1349 ntBASIC16.88■□□□□ 0.29
SNED1Q8TER0 AHCYP3-201ENST00000420053 1279 ntBASIC16.88■□□□□ 0.29
SNED1Q8TER0 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 AL773545.2-201ENST00000442149 472 ntBASIC16.88■□□□□ 0.29
SNED1Q8TER0 RN7SL578P-201ENST00000477781 283 ntBASIC16.88■□□□□ 0.29
SNED1Q8TER0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 ALG1L15P-201ENST00000482834 794 ntBASIC16.88■□□□□ 0.29
SNED1Q8TER0 AC008620.2-201ENST00000510294 1569 ntBASIC16.88■□□□□ 0.29
SNED1Q8TER0 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 CCND3P2-201ENST00000579393 537 ntBASIC16.88■□□□□ 0.29
SNED1Q8TER0 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 BX640514.1-201ENST00000583223 1918 ntBASIC16.88■□□□□ 0.29
SNED1Q8TER0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNED1Q8TER0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNED1Q8TER0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 OR7E155P-201ENST00000412208 1014 ntBASIC16.87■□□□□ 0.29
SNED1Q8TER0 KRT18P44-201ENST00000416086 1285 ntBASIC16.87■□□□□ 0.29
SNED1Q8TER0 RPSAP6-201ENST00000417882 882 ntBASIC16.87■□□□□ 0.29
SNED1Q8TER0 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 MAGEA7P-201ENST00000436482 942 ntBASIC16.87■□□□□ 0.29
SNED1Q8TER0 AC010900.1-201ENST00000449849 1296 ntBASIC16.87■□□□□ 0.29
SNED1Q8TER0 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 AC089987.1-201ENST00000551654 2209 ntBASIC16.87■□□□□ 0.29
SNED1Q8TER0 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 MIR632-201ENST00000385193 94 ntBASIC16.87■□□□□ 0.29
SNED1Q8TER0 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 AC041040.1-201ENST00000425197 460 ntBASIC16.87■□□□□ 0.29
SNED1Q8TER0 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC16.87■□□□□ 0.29
SNED1Q8TER0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNED1Q8TER0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms