Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 IL6RP1-201ENST00000417848 1273 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 IGHV7-56-201ENST00000518372 351 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 USP8-219ENST00000625664 1568 ntTSL 5 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 AC069061.4-201ENST00000581294 1347 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 RN7SKP255-201ENST00000363442 313 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 RN7SKP203-201ENST00000363618 332 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 RN7SKP71-201ENST00000364558 318 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 7SK.1-201ENST00000365328 331 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 RPE-208ENST00000436630 1128 ntTSL 2 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 CHCHD2P6-201ENST00000454346 447 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 RN7SL5P-201ENST00000581458 321 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 AC090950.1-202ENST00000605733 644 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 AC138430.2-201ENST00000624068 504 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 AC073592.10-201ENST00000624789 597 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 AC126177.1-201ENST00000547829 2218 ntBASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
COL22A1Q8NFW1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 AC005822.1-201ENST00000414124 1034 ntBASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 AL049792.1-201ENST00000424708 1262 ntBASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 RN7SL460P-201ENST00000582806 258 ntBASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 BIN3-212ENST00000640731 450 ntTSL 5 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL22A1Q8NFW1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 PHBP3-201ENST00000412562 819 ntBASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 DERL1-204ENST00000519018 575 ntTSL 4 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms