Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.41□□□□□ -0.26
TRA2BP62995 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 SALL4P6-201ENST00000429385 1691 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.4□□□□□ -0.26
TRA2BP62995 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.4□□□□□ -0.26
TRA2BP62995 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.4□□□□□ -0.26
TRA2BP62995 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.4□□□□□ -0.26
TRA2BP62995 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
TRA2BP62995 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRA2BP62995 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 RNA5SP359-201ENST00000364838 113 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 SNORA50C-201ENST00000408535 133 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 BX679664.3-201ENST00000414070 555 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.4□□□□□ -0.26
TRA2BP62995 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.4□□□□□ -0.26
TRA2BP62995 AC006033.1-201ENST00000440505 426 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 DUX4L50-201ENST00000455245 715 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.4□□□□□ -0.26
TRA2BP62995 AC113935.1-201ENST00000471722 555 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.4□□□□□ -0.26
TRA2BP62995 AC091804.1-201ENST00000486888 567 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 AC116345.2-201ENST00000512837 523 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.4□□□□□ -0.26
TRA2BP62995 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.4□□□□□ -0.26
TRA2BP62995 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 AC026740.1-201ENST00000607068 791 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 AL118558.3-201ENST00000607414 1079 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 SNORA50.1-201ENST00000628590 135 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 AL805961.1-203ENST00000641078 1258 ntBASIC13.4□□□□□ -0.26
TRA2BP62995 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.4□□□□□ -0.26
TRA2BP62995 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.4□□□□□ -0.26
TRA2BP62995 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
TRA2BP62995 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRA2BP62995 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRA2BP62995 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.39□□□□□ -0.27
TRA2BP62995 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TRA2BP62995 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.39□□□□□ -0.27
TRA2BP62995 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.39□□□□□ -0.27
TRA2BP62995 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRA2BP62995 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRA2BP62995 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRA2BP62995 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.39□□□□□ -0.27
TRA2BP62995 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 AC239868.1-201ENST00000369385 493 ntBASIC13.39□□□□□ -0.27
TRA2BP62995 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.39□□□□□ -0.27
TRA2BP62995 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.39□□□□□ -0.27
TRA2BP62995 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.39□□□□□ -0.27
TRA2BP62995 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.39□□□□□ -0.27
TRA2BP62995 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 AC108725.1-201ENST00000495472 409 ntBASIC13.39□□□□□ -0.27
TRA2BP62995 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.39□□□□□ -0.27
TRA2BP62995 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.39□□□□□ -0.27
TRA2BP62995 AL451050.2-201ENST00000606967 682 ntBASIC13.39□□□□□ -0.27
TRA2BP62995 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.39□□□□□ -0.27
TRA2BP62995 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.39□□□□□ -0.27
TRA2BP62995 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRA2BP62995 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms