Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RBPMSLP-201ENST00000433427 502 ntBASIC15.74■□□□□ 0.11
TM4SF4P48230 AC004910.1-201ENST00000433493 787 ntBASIC15.74■□□□□ 0.11
TM4SF4P48230 DUX4L31-201ENST00000446466 1136 ntBASIC15.74■□□□□ 0.11
TM4SF4P48230 AC069421.1-201ENST00000447462 323 ntBASIC15.74■□□□□ 0.11
TM4SF4P48230 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC15.74■□□□□ 0.11
TM4SF4P48230 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC15.74■□□□□ 0.11
TM4SF4P48230 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC15.74■□□□□ 0.11
TM4SF4P48230 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC15.74■□□□□ 0.11
TM4SF4P48230 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TM4SF4P48230 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC15.74■□□□□ 0.11
TM4SF4P48230 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TM4SF4P48230 PPY-202ENST00000587006 431 ntTSL 3 BASIC15.74■□□□□ 0.11
TM4SF4P48230 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TM4SF4P48230 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TM4SF4P48230 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TM4SF4P48230 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TM4SF4P48230 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.74■□□□□ 0.11
TM4SF4P48230 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.74■□□□□ 0.11
TM4SF4P48230 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TM4SF4P48230 AJ011931.1-201ENST00000618749 2492 ntBASIC15.74■□□□□ 0.11
TM4SF4P48230 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TM4SF4P48230 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TM4SF4P48230 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TM4SF4P48230 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TM4SF4P48230 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TM4SF4P48230 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.74■□□□□ 0.11
TM4SF4P48230 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TM4SF4P48230 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TM4SF4P48230 AP001331.1-201ENST00000413008 1015 ntBASIC15.73■□□□□ 0.11
TM4SF4P48230 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC15.73■□□□□ 0.11
TM4SF4P48230 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC15.73■□□□□ 0.11
TM4SF4P48230 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC15.73■□□□□ 0.11
TM4SF4P48230 AC010997.1-201ENST00000447646 350 ntBASIC15.73■□□□□ 0.11
TM4SF4P48230 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC15.73■□□□□ 0.11
TM4SF4P48230 RN7SL677P-201ENST00000466970 319 ntBASIC15.73■□□□□ 0.11
TM4SF4P48230 RN7SL69P-201ENST00000468423 272 ntBASIC15.73■□□□□ 0.11
TM4SF4P48230 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC15.73■□□□□ 0.11
TM4SF4P48230 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC15.73■□□□□ 0.11
TM4SF4P48230 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC15.73■□□□□ 0.11
TM4SF4P48230 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC15.73■□□□□ 0.11
TM4SF4P48230 AC005332.2-201ENST00000590010 930 ntBASIC15.73■□□□□ 0.11
TM4SF4P48230 AC009812.1-201ENST00000605948 1059 ntBASIC15.73■□□□□ 0.11
TM4SF4P48230 AC244097.1-201ENST00000621631 1216 ntBASIC15.73■□□□□ 0.11
TM4SF4P48230 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC15.73■□□□□ 0.11
TM4SF4P48230 AC245369.8-201ENST00000636589 306 ntBASIC15.73■□□□□ 0.11
TM4SF4P48230 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TM4SF4P48230 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
TM4SF4P48230 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.73■□□□□ 0.11
TM4SF4P48230 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TM4SF4P48230 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TM4SF4P48230 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.73■□□□□ 0.11
TM4SF4P48230 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TM4SF4P48230 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.72■□□□□ 0.11
TM4SF4P48230 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 AC013268.4-201ENST00000637413 2228 ntBASIC15.72■□□□□ 0.11
TM4SF4P48230 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
TM4SF4P48230 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.72■□□□□ 0.11
TM4SF4P48230 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.72■□□□□ 0.11
TM4SF4P48230 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 RN7SL33P-201ENST00000462543 342 ntBASIC15.72■□□□□ 0.11
TM4SF4P48230 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC15.72■□□□□ 0.11
TM4SF4P48230 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC15.72■□□□□ 0.11
TM4SF4P48230 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC15.72■□□□□ 0.11
TM4SF4P48230 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC15.72■□□□□ 0.11
TM4SF4P48230 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC15.72■□□□□ 0.11
TM4SF4P48230 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.72■□□□□ 0.11
TM4SF4P48230 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC15.72■□□□□ 0.11
TM4SF4P48230 PPT1-215ENST00000641471 2368 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 294.8 ms