Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 LINC01230-201ENST00000625222 3017 ntBASIC14.3□□□□□ -0.12
HOXD12P35452 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HOXD12P35452 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.29□□□□□ -0.12
HOXD12P35452 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.29□□□□□ -0.12
HOXD12P35452 RPL18AP8-201ENST00000486071 528 ntBASIC14.29□□□□□ -0.12
HOXD12P35452 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HOXD12P35452 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.29□□□□□ -0.12
HOXD12P35452 RNA5SP417-201ENST00000516459 108 ntBASIC14.29□□□□□ -0.12
HOXD12P35452 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 HERC2P11-201ENST00000562845 725 ntBASIC14.29□□□□□ -0.12
HOXD12P35452 AC100756.2-201ENST00000569537 736 ntBASIC14.29□□□□□ -0.12
HOXD12P35452 MIR5196-201ENST00000578146 115 ntBASIC14.29□□□□□ -0.12
HOXD12P35452 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.29□□□□□ -0.12
HOXD12P35452 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HOXD12P35452 LINC00431-202ENST00000636375 159 ntBASIC14.29□□□□□ -0.12
HOXD12P35452 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXD12P35452 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXD12P35452 AJ011931.1-201ENST00000618749 2492 ntBASIC14.29□□□□□ -0.12
HOXD12P35452 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXD12P35452 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
HOXD12P35452 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.28□□□□□ -0.12
HOXD12P35452 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HOXD12P35452 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 AC073869.2-201ENST00000417338 1026 ntBASIC14.28□□□□□ -0.12
HOXD12P35452 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HOXD12P35452 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXD12P35452 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HOXD12P35452 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.28□□□□□ -0.12
HOXD12P35452 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HOXD12P35452 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXD12P35452 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXD12P35452 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXD12P35452 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXD12P35452 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXD12P35452 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXD12P35452 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXD12P35452 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXD12P35452 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXD12P35452 RN7SL665P-201ENST00000578793 300 ntBASIC14.28□□□□□ -0.12
HOXD12P35452 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms