Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC011742.3-201ENST00000439053 820 ntBASIC12.24□□□□□ -0.45
CCL1P22362 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 AC008620.2-201ENST00000510294 1569 ntBASIC12.24□□□□□ -0.45
CCL1P22362 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 CR383656.2-201ENST00000548656 2254 ntBASIC12.24□□□□□ -0.45
CCL1P22362 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 AC005730.2-201ENST00000564549 1184 ntBASIC12.24□□□□□ -0.45
CCL1P22362 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.24□□□□□ -0.45
CCL1P22362 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CCL1P22362 AC004623.1-201ENST00000624592 2127 ntBASIC12.23□□□□□ -0.45
CCL1P22362 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 U91328.1-201ENST00000437528 223 ntBASIC12.23□□□□□ -0.45
CCL1P22362 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL1P22362 GAPDHP21-201ENST00000450301 1010 ntBASIC12.23□□□□□ -0.45
CCL1P22362 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CCL1P22362 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL1P22362 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CCL1P22362 RPSAP36-202ENST00000494591 1261 ntBASIC12.23□□□□□ -0.45
CCL1P22362 CHCHD2P2-201ENST00000503744 321 ntBASIC12.23□□□□□ -0.45
CCL1P22362 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.23□□□□□ -0.45
CCL1P22362 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL1P22362 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.23□□□□□ -0.45
CCL1P22362 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL1P22362 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL1P22362 BNIP3P13-201ENST00000599968 566 ntBASIC12.23□□□□□ -0.45
CCL1P22362 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CCL1P22362 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CCL1P22362 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CCL1P22362 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL1P22362 MARK2P16-201ENST00000605714 1723 ntBASIC12.23□□□□□ -0.45
CCL1P22362 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCL1P22362 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms