Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GPC4O75487 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 OR2I1P-208ENST00000641137 4948 ntBASIC14.38□□□□□ -0.11
GPC4O75487 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.38□□□□□ -0.11
GPC4O75487 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
GPC4O75487 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.38□□□□□ -0.11
GPC4O75487 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.38□□□□□ -0.11
GPC4O75487 HSPB1P2-201ENST00000448722 546 ntBASIC14.38□□□□□ -0.11
GPC4O75487 RPL13AP20-201ENST00000459725 609 ntBASIC14.38□□□□□ -0.11
GPC4O75487 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.38□□□□□ -0.11
GPC4O75487 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.38□□□□□ -0.11
GPC4O75487 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.38□□□□□ -0.11
GPC4O75487 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.38□□□□□ -0.11
GPC4O75487 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.38□□□□□ -0.11
GPC4O75487 AC027237.1-201ENST00000560942 655 ntBASIC14.38□□□□□ -0.11
GPC4O75487 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.38□□□□□ -0.11
GPC4O75487 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.38□□□□□ -0.11
GPC4O75487 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.38□□□□□ -0.11
GPC4O75487 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 CICP8-201ENST00000455800 2813 ntBASIC14.38□□□□□ -0.11
GPC4O75487 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
GPC4O75487 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 TUBB1P2-201ENST00000422712 1306 ntBASIC14.38□□□□□ -0.11
GPC4O75487 TUBB1P1-201ENST00000503144 1300 ntBASIC14.38□□□□□ -0.11
GPC4O75487 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GPC4O75487 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
GPC4O75487 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.37□□□□□ -0.11
GPC4O75487 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GPC4O75487 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
GPC4O75487 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.37□□□□□ -0.11
GPC4O75487 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
GPC4O75487 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GPC4O75487 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GPC4O75487 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 AC244394.1-201ENST00000435000 1665 ntBASIC14.37□□□□□ -0.11
GPC4O75487 AC105206.1-202ENST00000314927 2368 ntBASIC14.37□□□□□ -0.11
GPC4O75487 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.37□□□□□ -0.11
GPC4O75487 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GPC4O75487 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.37□□□□□ -0.11
GPC4O75487 AL157407.1-201ENST00000435784 904 ntBASIC14.37□□□□□ -0.11
GPC4O75487 RPS2P32-201ENST00000439199 892 ntBASIC14.37□□□□□ -0.11
GPC4O75487 GOLGA2P4-201ENST00000441462 777 ntBASIC14.37□□□□□ -0.11
GPC4O75487 Z93015.1-201ENST00000451718 390 ntBASIC14.37□□□□□ -0.11
GPC4O75487 FAM86HP-204ENST00000513466 959 ntBASIC14.37□□□□□ -0.11
GPC4O75487 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.37□□□□□ -0.11
GPC4O75487 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.37□□□□□ -0.11
GPC4O75487 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.37□□□□□ -0.11
GPC4O75487 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.37□□□□□ -0.11
GPC4O75487 AL162426.1-201ENST00000624141 743 ntBASIC14.37□□□□□ -0.11
GPC4O75487 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.37□□□□□ -0.11
GPC4O75487 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.37□□□□□ -0.11
GPC4O75487 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GPC4O75487 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms