Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC78A2IDD5 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC78A2IDD5 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
CCDC78A2IDD5 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
CCDC78A2IDD5 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC78A2IDD5 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 AL354877.1-201ENST00000424412 413 ntBASIC14.52□□□□□ -0.09
CCDC78A2IDD5 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 RPSAP36-202ENST00000494591 1261 ntBASIC14.52□□□□□ -0.09
CCDC78A2IDD5 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 AL445209.1-201ENST00000607269 3491 ntBASIC14.52□□□□□ -0.09
CCDC78A2IDD5 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC78A2IDD5 AC072061.1-201ENST00000569710 2234 ntBASIC14.51□□□□□ -0.09
CCDC78A2IDD5 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.51□□□□□ -0.09
CCDC78A2IDD5 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 AC022494.1-201ENST00000466044 728 ntBASIC14.51□□□□□ -0.09
CCDC78A2IDD5 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.51□□□□□ -0.09
CCDC78A2IDD5 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 RN7SL560P-201ENST00000577943 264 ntBASIC14.51□□□□□ -0.09
CCDC78A2IDD5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 AL096828.3-201ENST00000615354 462 ntBASIC14.51□□□□□ -0.09
CCDC78A2IDD5 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 AC015818.8-201ENST00000587907 1519 ntBASIC14.51□□□□□ -0.09
CCDC78A2IDD5 AC105206.1-202ENST00000314927 2368 ntBASIC14.51□□□□□ -0.09
CCDC78A2IDD5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC78A2IDD5 CICP17-201ENST00000418553 2377 ntBASIC14.51□□□□□ -0.09
CCDC78A2IDD5 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC78A2IDD5 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC78A2IDD5 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC78A2IDD5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC78A2IDD5 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC78A2IDD5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC78A2IDD5 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC78A2IDD5 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms