Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
VGLL1Q99990 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
VGLL1Q99990 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
VGLL1Q99990 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC10.9□□□□□ -0.66
VGLL1Q99990 MGST3-203ENST00000367885 680 ntTSL 2 BASIC10.9□□□□□ -0.66
VGLL1Q99990 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 PNKD-204ENST00000436005 978 ntTSL 5 BASIC10.9□□□□□ -0.66
VGLL1Q99990 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
VGLL1Q99990 AC011495.1-201ENST00000498085 584 ntBASIC10.9□□□□□ -0.66
VGLL1Q99990 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC10.9□□□□□ -0.66
VGLL1Q99990 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
VGLL1Q99990 NEU3-203ENST00000529024 581 ntTSL 3 BASIC10.9□□□□□ -0.66
VGLL1Q99990 PTP4A1P2-201ENST00000546033 454 ntBASIC10.9□□□□□ -0.66
VGLL1Q99990 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 AC106820.3-201ENST00000561653 397 ntBASIC10.9□□□□□ -0.66
VGLL1Q99990 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
VGLL1Q99990 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 AC104506.1-201ENST00000609247 429 ntBASIC10.9□□□□□ -0.66
VGLL1Q99990 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC10.9□□□□□ -0.66
VGLL1Q99990 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
VGLL1Q99990 AC005014.1-201ENST00000432006 2976 ntBASIC10.9□□□□□ -0.66
VGLL1Q99990 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
VGLL1Q99990 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VGLL1Q99990 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
VGLL1Q99990 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
VGLL1Q99990 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
VGLL1Q99990 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC10.9□□□□□ -0.67
VGLL1Q99990 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
VGLL1Q99990 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
VGLL1Q99990 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
VGLL1Q99990 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
VGLL1Q99990 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC10.9□□□□□ -0.67
VGLL1Q99990 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
VGLL1Q99990 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
VGLL1Q99990 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC10.9□□□□□ -0.67
VGLL1Q99990 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
VGLL1Q99990 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC10.89□□□□□ -0.67
VGLL1Q99990 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms