Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 AC005229.1-201ENST00000392885 409 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 BCRP2-202ENST00000447763 634 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 BCRP6-201ENST00000510112 632 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 BCRP7-201ENST00000511549 544 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 AP001889.1-201ENST00000525414 633 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 GNRHR2-203ENST00000581100 1187 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 AC107375.1-201ENST00000564464 2231 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 TUBB8P4-201ENST00000511806 1324 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 KRT8P28-201ENST00000433288 1390 ntBASIC13.09□□□□□ -0.31
SNX18Q96RF0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNX18Q96RF0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 POM121L4P-202ENST00000427789 1891 ntBASIC13.09□□□□□ -0.31
SNX18Q96RF0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 AL035414.1-201ENST00000451327 857 ntBASIC13.09□□□□□ -0.31
SNX18Q96RF0 CTBP2P5-201ENST00000454986 1264 ntBASIC13.09□□□□□ -0.31
SNX18Q96RF0 AC119751.2-201ENST00000504529 210 ntBASIC13.09□□□□□ -0.31
SNX18Q96RF0 RNA5SP486-201ENST00000515961 83 ntBASIC13.09□□□□□ -0.31
SNX18Q96RF0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 AL022328.1-201ENST00000610050 478 ntBASIC13.09□□□□□ -0.31
SNX18Q96RF0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.09□□□□□ -0.31
SNX18Q96RF0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.09□□□□□ -0.31
SNX18Q96RF0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms