Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 AC012362.1-201ENST00000434906 739 ntBASIC15.87■□□□□ 0.13
TRIM50Q86XT4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 AL354861.1-201ENST00000445213 355 ntBASIC15.87■□□□□ 0.13
TRIM50Q86XT4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 RNA5SP417-201ENST00000516459 108 ntBASIC15.87■□□□□ 0.13
TRIM50Q86XT4 IGHV3-37-201ENST00000518544 340 ntBASIC15.87■□□□□ 0.13
TRIM50Q86XT4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 RN7SL470P-201ENST00000583069 259 ntBASIC15.87■□□□□ 0.13
TRIM50Q86XT4 MIR2392-201ENST00000584881 84 ntBASIC15.87■□□□□ 0.13
TRIM50Q86XT4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM50Q86XT4 HSPA8P5-201ENST00000456928 2069 ntBASIC15.87■□□□□ 0.13
TRIM50Q86XT4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 CTBP2P4-201ENST00000513884 920 ntBASIC15.86■□□□□ 0.13
TRIM50Q86XT4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 AC007952.4-201ENST00000573866 637 ntBASIC15.86■□□□□ 0.13
TRIM50Q86XT4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 LINC00552-201ENST00000625151 2579 ntBASIC15.86■□□□□ 0.13
TRIM50Q86XT4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM50Q86XT4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.85■□□□□ 0.13
TRIM50Q86XT4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.85■□□□□ 0.13
TRIM50Q86XT4 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 AC004837.1-201ENST00000446267 564 ntBASIC15.85■□□□□ 0.13
TRIM50Q86XT4 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 OR5BD1P-201ENST00000532527 817 ntBASIC15.85■□□□□ 0.13
TRIM50Q86XT4 KLF17P1-201ENST00000547105 1126 ntBASIC15.85■□□□□ 0.13
TRIM50Q86XT4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms