Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT9P35527 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
KRT9P35527 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
KRT9P35527 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT9P35527 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.67■□□□□ 0.1
KRT9P35527 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
KRT9P35527 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.67■□□□□ 0.1
KRT9P35527 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.67■□□□□ 0.1
KRT9P35527 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT9P35527 AL355994.2-201ENST00000447882 704 ntBASIC15.67■□□□□ 0.1
KRT9P35527 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT9P35527 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.67■□□□□ 0.1
KRT9P35527 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT9P35527 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.67■□□□□ 0.1
KRT9P35527 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.67■□□□□ 0.1
KRT9P35527 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT9P35527 PPY2P-201ENST00000582808 702 ntBASIC15.67■□□□□ 0.1
KRT9P35527 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 AC008825.2-201ENST00000603374 718 ntBASIC15.67■□□□□ 0.1
KRT9P35527 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT9P35527 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT9P35527 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.67■□□□□ 0.1
KRT9P35527 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
KRT9P35527 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT9P35527 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 PCDHA5-203ENST00000614258 4248 ntBASIC15.67■□□□□ 0.1
KRT9P35527 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT9P35527 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT9P35527 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
KRT9P35527 PEG13-201ENST00000631594 5667 ntBASIC15.67■□□□□ 0.1
KRT9P35527 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
KRT9P35527 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT9P35527 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
KRT9P35527 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT9P35527 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KRT9P35527 AC138969.2-201ENST00000532739 9932 ntBASIC15.66■□□□□ 0.1
KRT9P35527 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
KRT9P35527 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT9P35527 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT9P35527 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT9P35527 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.66■□□□□ 0.1
KRT9P35527 HOMER2P2-201ENST00000451621 847 ntBASIC15.66■□□□□ 0.1
KRT9P35527 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT9P35527 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT9P35527 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KRT9P35527 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.66■□□□□ 0.1
KRT9P35527 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT9P35527 C2orf69P2-201ENST00000562032 1123 ntBASIC15.66■□□□□ 0.1
KRT9P35527 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.66■□□□□ 0.1
KRT9P35527 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT9P35527 AL358472.3-201ENST00000608147 415 ntBASIC15.66■□□□□ 0.1
KRT9P35527 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT9P35527 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT9P35527 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT9P35527 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
KRT9P35527 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT9P35527 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KRT9P35527 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT9P35527 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT9P35527 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT9P35527 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT9P35527 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT9P35527 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
KRT9P35527 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
KRT9P35527 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT9P35527 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT9P35527 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT9P35527 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
KRT9P35527 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
KRT9P35527 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms