Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.92□□□□□ -0.02
RB1P06400 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 AGAP7P-201ENST00000582299 2062 ntBASIC14.92□□□□□ -0.02
RB1P06400 AGAP14-201ENST00000624701 2060 ntBASIC14.92□□□□□ -0.02
RB1P06400 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RB1P06400 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.92□□□□□ -0.02
RB1P06400 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.91□□□□□ -0.02
RB1P06400 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RB1P06400 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.91□□□□□ -0.02
RB1P06400 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.91□□□□□ -0.02
RB1P06400 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.91□□□□□ -0.02
RB1P06400 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.91□□□□□ -0.02
RB1P06400 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.91□□□□□ -0.02
RB1P06400 AC078814.4-201ENST00000546650 327 ntBASIC14.91□□□□□ -0.02
RB1P06400 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.91□□□□□ -0.02
RB1P06400 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.91□□□□□ -0.02
RB1P06400 AL590235.1-201ENST00000564650 861 ntBASIC14.91□□□□□ -0.02
RB1P06400 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.91□□□□□ -0.02
RB1P06400 RN7SL605P-201ENST00000577229 281 ntBASIC14.91□□□□□ -0.02
RB1P06400 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.91□□□□□ -0.02
RB1P06400 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.91□□□□□ -0.02
RB1P06400 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
RB1P06400 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RB1P06400 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RB1P06400 AC068418.2-201ENST00000577309 3703 ntBASIC14.91□□□□□ -0.02
RB1P06400 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.91□□□□□ -0.02
RB1P06400 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RB1P06400 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RB1P06400 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RB1P06400 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.9□□□□□ -0.02
RB1P06400 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RB1P06400 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RB1P06400 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC14.9□□□□□ -0.02
RB1P06400 OR10N1P-201ENST00000392758 869 ntBASIC14.9□□□□□ -0.02
RB1P06400 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RB1P06400 MIR1307-201ENST00000408840 149 ntBASIC14.9□□□□□ -0.02
RB1P06400 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.9□□□□□ -0.02
RB1P06400 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC14.9□□□□□ -0.02
RB1P06400 RN7SL351P-201ENST00000469306 248 ntBASIC14.9□□□□□ -0.02
RB1P06400 ALG1L7P-201ENST00000502317 768 ntBASIC14.9□□□□□ -0.02
RB1P06400 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.9□□□□□ -0.02
RB1P06400 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms