Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 MIR3197-201ENST00000582241 73 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 AC138761.1-201ENST00000584393 385 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 AC133539.2-201ENST00000604757 467 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 LINC02084-201ENST00000606069 1096 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 AL138725.1-201ENST00000407347 1314 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 FAM90A11P-201ENST00000518378 2218 ntBASIC15.59■□□□□ 0.09
CCDC66A2RUB6 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC66A2RUB6 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC66A2RUB6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC66A2RUB6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC66A2RUB6 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC66A2RUB6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC66A2RUB6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC66A2RUB6 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC15.58■□□□□ 0.09
CCDC66A2RUB6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.58■□□□□ 0.09
CCDC66A2RUB6 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC66A2RUB6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CCDC66A2RUB6 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 ENPP7P5-201ENST00000541031 1031 ntBASIC15.58■□□□□ 0.08
CCDC66A2RUB6 AC123567.1-201ENST00000548294 1261 ntBASIC15.58■□□□□ 0.08
CCDC66A2RUB6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 TMEM261P1-201ENST00000604899 340 ntBASIC15.58■□□□□ 0.08
CCDC66A2RUB6 AC009118.2-201ENST00000613275 655 ntBASIC15.58■□□□□ 0.08
CCDC66A2RUB6 AC005252.2-201ENST00000624630 1141 ntBASIC15.58■□□□□ 0.08
CCDC66A2RUB6 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 KRT8P35-201ENST00000483942 1338 ntBASIC15.58■□□□□ 0.08
CCDC66A2RUB6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 AL391825.1-201ENST00000457671 1364 ntBASIC15.58■□□□□ 0.08
CCDC66A2RUB6 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC66A2RUB6 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 AC022400.8-201ENST00000623453 3599 ntBASIC15.57■□□□□ 0.08
CCDC66A2RUB6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 AC215219.1-201ENST00000400706 1817 ntBASIC15.57■□□□□ 0.08
CCDC66A2RUB6 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 KRT18P25-201ENST00000508931 1278 ntBASIC15.57■□□□□ 0.08
CCDC66A2RUB6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.57■□□□□ 0.08
CCDC66A2RUB6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms