Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 KRT18P13-201ENST00000400056 1290 ntBASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 KRT8P28-201ENST00000433288 1390 ntBASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 DNAJB3-201ENST00000446806 729 ntBASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 AC026271.4-201ENST00000578214 1833 ntBASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 INTS4P2-202ENST00000614726 2019 ntBASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 OR2I1P-208ENST00000641137 4948 ntBASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 AC015819.3-201ENST00000624305 2674 ntBASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RCL1Q9Y2P8 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PDIA3P1-201ENST00000471856 1510 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 BTBD7P1-201ENST00000447253 1453 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 ARSEP1-201ENST00000420443 635 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 RN7SL399P-201ENST00000471648 279 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms