Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 AC006001.1-201ENST00000325130 474 ntBASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 AC112492.5-201ENST00000421897 457 ntBASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 FAM197Y7-201ENST00000432892 766 ntBASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 AC138951.2-201ENST00000623455 1161 ntBASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 SHC1P1-201ENST00000425230 1745 ntBASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 AL157996.1-201ENST00000624684 2299 ntBASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.27□□□□□ -0.28
POLR2J2Q9GZM3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 AL590640.2-201ENST00000457038 527 ntBASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 KRT90P-201ENST00000549264 1064 ntBASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 AL591163.1-201ENST00000641757 987 ntBASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR2J2Q9GZM3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms