Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 MIR611-201ENST00000384869 67 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 OLA1P2-201ENST00000395519 1264 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 MPV17-209ENST00000405983 859 ntTSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 MED15P3-201ENST00000413613 326 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 SNRPCP15-201ENST00000424055 192 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 SNRPD2P2-201ENST00000473818 333 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.98■□□□□ 0.15
PTPN18Q99952 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC15.98■□□□□ 0.15
PTPN18Q99952 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 AC123912.6-201ENST00000612657 315 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 AC020922.4-201ENST00000621389 339 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 MEP1AP1-201ENST00000636082 1097 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 RN7SL832P-201ENST00000607781 1756 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PTPN18Q99952 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC15.97■□□□□ 0.15
PTPN18Q99952 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.97■□□□□ 0.15
PTPN18Q99952 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.97■□□□□ 0.15
PTPN18Q99952 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.97■□□□□ 0.15
PTPN18Q99952 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PTPN18Q99952 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PTPN18Q99952 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PTPN18Q99952 CASP2-203ENST00000392925 616 ntTSL 3 BASIC15.97■□□□□ 0.15
PTPN18Q99952 AC079250.1-201ENST00000456046 531 ntBASIC15.97■□□□□ 0.15
PTPN18Q99952 AC008494.1-201ENST00000497612 796 ntBASIC15.97■□□□□ 0.15
PTPN18Q99952 AC026412.1-206ENST00000502273 206 ntBASIC15.97■□□□□ 0.15
PTPN18Q99952 AC022447.6-201ENST00000515522 438 ntBASIC15.97■□□□□ 0.15
PTPN18Q99952 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC15.97■□□□□ 0.15
PTPN18Q99952 SRPK2P-201ENST00000523408 1100 ntBASIC15.97■□□□□ 0.15
PTPN18Q99952 AC010202.1-201ENST00000551181 405 ntBASIC15.97■□□□□ 0.15
PTPN18Q99952 AC142086.5-202ENST00000562500 217 ntBASIC15.97■□□□□ 0.15
PTPN18Q99952 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC15.97■□□□□ 0.15
PTPN18Q99952 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN18Q99952 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
PTPN18Q99952 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.97■□□□□ 0.15
PTPN18Q99952 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN18Q99952 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN18Q99952 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PTPN18Q99952 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN18Q99952 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PTPN18Q99952 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN18Q99952 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
PTPN18Q99952 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms