Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 ARSEP1-201ENST00000420443 635 ntBASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 BRI3BPP1-201ENST00000594224 787 ntBASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 KRT8P28-201ENST00000433288 1390 ntBASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 GHET1-201ENST00000627071 1906 ntBASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 INTS4P2-202ENST00000614726 2019 ntBASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 AC087499.6-201ENST00000411576 835 ntBASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 AC008761.3-201ENST00000624803 892 ntBASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 AL391825.1-201ENST00000457671 1364 ntBASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ANKRD55Q3KP44 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms