Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.25■□□□□ 0.03
SMAD3P84022 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.25■□□□□ 0.03
SMAD3P84022 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.25■□□□□ 0.03
SMAD3P84022 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SMAD3P84022 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SMAD3P84022 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 ALG1L15P-201ENST00000482834 794 ntBASIC15.25■□□□□ 0.03
SMAD3P84022 ALG1L7P-201ENST00000502317 768 ntBASIC15.25■□□□□ 0.03
SMAD3P84022 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 AC011431.1-201ENST00000512971 230 ntBASIC15.25■□□□□ 0.03
SMAD3P84022 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 BAK1P2-201ENST00000532665 631 ntBASIC15.25■□□□□ 0.03
SMAD3P84022 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 MYL6-215ENST00000549566 685 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 RN7SL605P-201ENST00000577229 281 ntBASIC15.25■□□□□ 0.03
SMAD3P84022 EEF1DP7-201ENST00000580496 513 ntBASIC15.25■□□□□ 0.03
SMAD3P84022 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 AC010503.4-201ENST00000615487 688 ntBASIC15.25■□□□□ 0.03
SMAD3P84022 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.25■□□□□ 0.03
SMAD3P84022 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SMAD3P84022 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
SMAD3P84022 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SMAD3P84022 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
SMAD3P84022 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.25■□□□□ 0.03
SMAD3P84022 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD3P84022 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SMAD3P84022 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SMAD3P84022 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SMAD3P84022 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
SMAD3P84022 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC15.24■□□□□ 0.03
SMAD3P84022 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.24■□□□□ 0.03
SMAD3P84022 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SMAD3P84022 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 HNRNPA1P25-201ENST00000422644 937 ntBASIC15.24■□□□□ 0.03
SMAD3P84022 AC092573.1-201ENST00000433054 884 ntBASIC15.24■□□□□ 0.03
SMAD3P84022 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.24■□□□□ 0.03
SMAD3P84022 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC15.24■□□□□ 0.03
SMAD3P84022 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC15.24■□□□□ 0.03
SMAD3P84022 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.24■□□□□ 0.03
SMAD3P84022 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.24■□□□□ 0.03
SMAD3P84022 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.24■□□□□ 0.03
SMAD3P84022 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SMAD3P84022 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC15.24■□□□□ 0.03
SMAD3P84022 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC15.24■□□□□ 0.03
SMAD3P84022 AC006986.1-201ENST00000612764 241 ntBASIC15.24■□□□□ 0.03
SMAD3P84022 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.24■□□□□ 0.03
SMAD3P84022 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.24■□□□□ 0.03
SMAD3P84022 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms