Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 AC027020.2-201ENST00000602585 2389 ntBASIC16.33■□□□□ 0.2
CLCN1P35523 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN1P35523 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLCN1P35523 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN1P35523 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN1P35523 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CLCN1P35523 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN1P35523 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLCN1P35523 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN1P35523 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLCN1P35523 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN1P35523 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 AC091917.2-201ENST00000505002 744 ntBASIC16.32■□□□□ 0.2
CLCN1P35523 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 AC120045.2-201ENST00000567334 178 ntBASIC16.32■□□□□ 0.2
CLCN1P35523 AC007541.1-201ENST00000570282 1469 ntBASIC16.32■□□□□ 0.2
CLCN1P35523 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN1P35523 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN1P35523 AL132655.2-201ENST00000596276 594 ntBASIC16.32■□□□□ 0.2
CLCN1P35523 AC093726.1-201ENST00000608064 963 ntBASIC16.32■□□□□ 0.2
CLCN1P35523 MIR6074-201ENST00000612054 107 ntBASIC16.32■□□□□ 0.2
CLCN1P35523 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN1P35523 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 AC004623.1-201ENST00000624592 2127 ntBASIC16.32■□□□□ 0.2
CLCN1P35523 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN1P35523 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN1P35523 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLCN1P35523 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLCN1P35523 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN1P35523 MIR193BHG-211ENST00000641433 5365 ntBASIC16.32■□□□□ 0.2
CLCN1P35523 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN1P35523 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN1P35523 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN1P35523 AL359510.2-201ENST00000624958 2249 ntBASIC16.31■□□□□ 0.2
CLCN1P35523 INTS4P2-202ENST00000614726 2019 ntBASIC16.31■□□□□ 0.2
CLCN1P35523 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLCN1P35523 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLCN1P35523 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN1P35523 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 AC134915.1-201ENST00000426461 574 ntBASIC16.31■□□□□ 0.2
CLCN1P35523 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 FAM207CP-201ENST00000443486 507 ntBASIC16.31■□□□□ 0.2
CLCN1P35523 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN1P35523 RPL13AP25-201ENST00000484130 612 ntBASIC16.31■□□□□ 0.2
CLCN1P35523 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN1P35523 AC092552.1-201ENST00000547243 906 ntBASIC16.31■□□□□ 0.2
CLCN1P35523 AC123567.1-201ENST00000548294 1261 ntBASIC16.31■□□□□ 0.2
CLCN1P35523 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN1P35523 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN1P35523 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN1P35523 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN1P35523 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 AC008761.3-201ENST00000624803 892 ntBASIC16.31■□□□□ 0.2
CLCN1P35523 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLCN1P35523 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLCN1P35523 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN1P35523 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN1P35523 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLCN1P35523 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 AC022364.1-202ENST00000617468 2409 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLCN1P35523 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms